nwfsc-cb
. See also theR-universe documentation.Package: shellfishrisks 0.1.1
shellfishrisks: Package for running agent based model exploring genetic risks of aquaculture production
This package runs an agent based model in Python, exploring the genetic risks of aquaculture production on wild populations.
Authors:
shellfishrisks_0.1.1.tar.gz
shellfishrisks_0.1.1.zip(r-4.5)shellfishrisks_0.1.1.zip(r-4.4)shellfishrisks_0.1.1.zip(r-4.3)
shellfishrisks_0.1.1.tgz(r-4.4-any)shellfishrisks_0.1.1.tgz(r-4.3-any)
shellfishrisks_0.1.1.tar.gz(r-4.5-noble)shellfishrisks_0.1.1.tar.gz(r-4.4-noble)
shellfishrisks_0.1.1.tgz(r-4.4-emscripten)shellfishrisks_0.1.1.tgz(r-4.3-emscripten)
shellfishrisks.pdf |shellfishrisks.html✨
shellfishrisks/json (API)
# Install 'shellfishrisks' in R: |
install.packages('shellfishrisks', repos = c('https://nmfs-opensci.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/nwfsc-cb/shellfish-genetic-risks/issues
Last updated 3 years agofrom:ce5064d927. Checks:ERROR: 7. Indexed: no.
Target | Result | Date |
---|---|---|
Doc / Vignettes | FAIL | Nov 26 2024 |
R-4.5-win | ERROR | Nov 26 2024 |
R-4.5-linux | ERROR | Nov 26 2024 |
R-4.4-win | ERROR | Nov 26 2024 |
R-4.4-mac | ERROR | Nov 26 2024 |
R-4.3-win | ERROR | Nov 26 2024 |
R-4.3-mac | ERROR | Nov 26 2024 |
Exports:%>%generate_ctrl_fileinstall_pypkgsload_shellfishplot_shellfishrun_ctrl_folderrun_shellfishrisk_ctrlfileserve_shellfishtheme_shellfish
Dependencies:bitbit64clicliprcodetoolscolorspacecpp11crayondoParalleldplyrfansifarverforeachgenericsggplot2gluegtableherehmsisobanditeratorsjsonlitelabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigpngprettyunitsprogresspurrrR6rappdirsRColorBrewerRcppRcppTOMLreadrreticulaterlangrprojrootscalesstringistringrtibbletidyrtidyselecttzdbutf8vctrsviridisLitevroomwithr
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Generate a control file from the default template | generate_ctrl_file |
Install Required Python Packages | install_pypkgs |
load shellfish model | load_shellfish |
Plot Shellfish | plot_shellfish |
Run all control files in a folder | run_ctrl_folder |
Run shellfishrisk from control file | run_shellfishrisk_ctrlfile |
Load and Serve Shellfish Genetics Results | serve_shellfish |
ggplot2 theme for shellfishrisks | theme_shellfish |