Current SRKW PopulationUpdated 1 days ago

Eric J. Ward

Rendered from a1currentpop.Rmd in kwdemog 1.0.3.
Density dependence in killer whalesUpdated 1 days ago

Eric J. Ward

Rendered from a5densitydependence.Rmd in kwdemog 1.0.3.
Examples of using data and functionsUpdated 1 days ago

Eric J. Ward

Rendered from a0vignette.Rmd in kwdemog 1.0.3.
Future population projectionsUpdated 1 days ago

Eric J. Ward

Rendered from a6projections.Rmd in kwdemog 1.0.3.
Sex ratio at birthUpdated 1 days ago

Eric J. Ward

Rendered from a3srb.Rmd in kwdemog 1.0.3.
Time series of reproductive femalesUpdated 1 days ago

Eric J. Ward

Rendered from a4reprofemales.Rmd in kwdemog 1.0.3.
Create your own likelihood functionUpdated 13 days ago

Paul Carvalho

Rendered from likelihood-template.Rmd in FishSET 1.1.0.
FishSET GUI Quickstart GuideUpdated 4 months ago

Lisa Pfeiffer

Rendered from FishSET_GUI_Quickstart_Guide.Rmd in FishSET 1.1.0.
Making a spatial grid fileUpdated 4 months ago

Paul Carvalho

Rendered from making_a_spatial_grid.Rmd in FishSET 1.1.0.
Overview of mvdlm packageUpdated 6 months ago

Eric J. Ward

Rendered from a01_overview.Rmd in mvdlm 0.1.0.
Scallop Conditional Logit Model ExampleUpdated 7 months ago

Bryce McManus

Rendered from scallop-mod-example.Rmd in FishSET 1.1.0.
Scallop ExampleUpdated 7 months ago

Lisa Pfeiffer

Rendered from scallop-example.Rmd in FishSET 1.1.0.
FishSET R package functionsUpdated 7 months ago

Lisa Pfeiffer

Rendered from FishSET_FunctionList.Rmd in FishSET 1.1.0.
Extracting estimated and derived parametersUpdated 9 months ago

Eric J. Ward

Rendered from a4_derived.Rmd in phenomix 1.0.4.
Fitting time varying phenology models with the phenomix packageUpdated 9 months ago

Eric J. Ward

Rendered from a1_examples.Rmd in phenomix 1.0.4.
Including covariatesUpdated 9 months ago

Eric J. Ward

Rendered from a2_covariates.Rmd in phenomix 1.0.4.
TroubleshootingUpdated 9 months ago

Eric J. Ward

Rendered from a3_troubleshooting.Rmd in phenomix 1.0.4.
Overview of the bayesdfa packageUpdated 12 months ago

Eric J. Ward, Sean C. Anderson, Mary E. Hunsicker, Mike A. Litzow, Luis A. Damiano, Mark D. Scheuerell, Elizabeth E. Holmes, Nick Tolimieri

Rendered from a1_bayesdfa.Rmd in bayesdfa 1.3.3.
Basic HLI queriesUpdated 12 months ago

Eli Holmes

Rendered from basics.Rmd in rCAX 1.0.3.
Getting StartedUpdated 12 months ago

Eli Holmes

Rendered from setup.Rmd in rCAX 1.0.3.
Fitting models with zoidUpdated 1 years ago

Eric J. Ward

Rendered from a01_fitting.Rmd in zoid 1.3.1.
MAR1 State-Space ModelUpdated 1 years ago

Elizabeth Eli Holmes

Rendered from MAR1-State-Space.Rmd in MAR1 2.3.
Getting_StartedUpdated 2 years ago

Elizabeth Eli Holmes

Rendered from Getting_Started.Rmd in MAR1 2.3.
Speed ComparisonsUpdated 2 years ago

Elizabeth E. Holmes

Rendered from Comparisons.Rmd in marssTMB 0.0.14.
Learning MARSSUpdated 2 years ago

Elizabeth Eli Holmes

Rendered from Learning_MARSS.Rmd in MARSS 3.11.9.
EM_DerivationUpdated 2 years ago

Elizabeth Eli Holmes

Rendered from EMDerivation.Rnw in MARSS 3.11.9.
Quick Start GuideUpdated 2 years ago

Elizabeth Eli Holmes

Rendered from Quick_Start.Rmd in MARSS 3.11.9.
ResidualsUpdated 2 years ago

Elizabeth Eli Holmes

Rendered from Residuals.Rnw in MARSS 3.11.9.
User GuideUpdated 2 years ago

Elizabeth Eli Holmes

Rendered from UserGuide.Rnw in MARSS 3.11.9.
dfaTMB: Dynamic Factor AnalysisUpdated 2 years ago

Eli Holmes

Rendered from dfaTMB.Rmd in marssTMB 0.0.14.
Quick StartUpdated 2 years ago

Elizabeth E. Holmes

Rendered from Quick_Start.Rmd in marssTMB 0.0.14.
Dynamic Factor AnalysisUpdated 2 years ago

Elizabeth E. Holmes

Rendered from MARSS_TMB.Rmd in marssTMB 0.0.14.
Optimization discussionUpdated 2 years ago

Elizabeth E. Holmes

Rendered from Optimization.Rmd in marssTMB 0.0.14.
Combining data with bayesdfaUpdated 2 years ago

Eric J. Ward, Sean C. Anderson, Mary E. Hunsicker, Mike A. Litzow, Luis A. Damiano, Mark D. Scheuerell, Elizabeth E. Holmes, Nick Tolimieri

Rendered from a2_combining_data.Rmd in bayesdfa 1.3.3.
rCAX API query functionUpdated 2 years ago

Eli Holmes

Rendered from api_get.Rmd in rCAX 1.0.3.
Estimating process trend variability with bayesdfaUpdated 2 years ago

Eric J. Ward, Sean C. Anderson, Mary E. Hunsicker, Mike A. Litzow, Luis A. Damiano, Mark D. Scheuerell, Elizabeth E. Holmes, Nick Tolimieri

Rendered from a5_estimate_process_sigma.Rmd in bayesdfa 1.3.3.
Examples of fitting DFA models with lots of dataUpdated 2 years ago

Eric J. Ward, Sean C. Anderson, Mary E. Hunsicker, Mike A. Litzow, Luis A. Damiano, Mark D. Scheuerell, Elizabeth E. Holmes, Nick Tolimieri

Rendered from a7_bigdata.Rmd in bayesdfa 1.3.3.
Examples of fitting smooth trend DFA modelsUpdated 2 years ago

Eric J. Ward, Sean C. Anderson, Mary E. Hunsicker, Mike A. Litzow, Luis A. Damiano, Mark D. Scheuerell, Elizabeth E. Holmes, Nick Tolimieri

Rendered from a4_smooth.Rmd in bayesdfa 1.3.3.
Examples of including covariates with bayesdfaUpdated 2 years ago

Eric J. Ward, Sean C. Anderson, Mary E. Hunsicker, Mike A. Litzow, Luis A. Damiano, Mark D. Scheuerell, Elizabeth E. Holmes, Nick Tolimieri

Rendered from a3_covariates.Rmd in bayesdfa 1.3.3.
Fitting compositional dynamic factor models with bayesdfaUpdated 2 years ago

Eric J. Ward, Sean C. Anderson, Mary E. Hunsicker, Mike A. Litzow, Luis A. Damiano, Mark D. Scheuerell, Elizabeth E. Holmes, Nick Tolimieri

Rendered from a6_compositional.Rmd in bayesdfa 1.3.3.
Using CAX HLI dataUpdated 2 years ago

Eli Holmes

Rendered from cax.Rmd in rCAX 1.0.3.
CAX DatasetsUpdated 2 years ago

Eli Holmes

Rendered from CAX_Tables.Rmd in rCAX 1.0.3.
CAX Data Terms of UseUpdated 2 years ago

Eli Holmes

Rendered from terms.Rmd in rCAX 1.0.3.
Examples using the varlasso packageUpdated 2 years ago

Eric Ward

Rendered from a1_examples.Rmd in varlasso 0.0.1.
Hood-Canal-HCchum2020Updated 3 years ago

Elizabeth Holmes - NOAA Federal

Rendered from Hood-Canal-HCchum2020.Rmd in VRData 2.3.
Ozette-Lake-Sockeye-Salmon-ESU-OzetteSockeye2020Updated 3 years ago

Elizabeth Holmes - NOAA Federal

Rendered from Ozette-Lake-Sockeye-Salmon-ESU-OzetteSockeye2020.Rmd in VRData 2.3.
Puget-Sound-PSchinook2020Updated 3 years ago

Elizabeth Holmes - NOAA Federal

Rendered from Puget-Sound-PSchinook2020.Rmd in VRData 2.3.
Salmon-Chinook-Lower-Columbia-River-ESU-LCchinook2020Updated 3 years ago

Elizabeth Holmes - NOAA Federal

Rendered from Salmon-Chinook-Lower-Columbia-River-ESU-LCchinook2020.Rmd in VRData 2.3.
Salmon-Chinook-Snake-River-fall-run-ESU-ICSRFchinook2021Updated 3 years ago

Elizabeth Holmes - NOAA Federal

Rendered from Salmon-Chinook-Snake-River-fall-run-ESU-ICSRFchinook2021.Rmd in VRData 2.3.
Salmon-Chinook-Snake-River-spring-summer-run-ESU-ICSRSSchinookModelUpdated 3 years ago

Elizabeth Holmes - NOAA Federal

Rendered from Salmon-Chinook-Snake-River-spring-summer-run-ESU-ICSRSSchinookModel.Rmd in VRData 2.3.
Salmon-Chinook-Snake-River-spring-summer-run-ESU-ICSRSSchinookSurvey2020Updated 3 years ago

Elizabeth Holmes - NOAA Federal

Rendered from Salmon-Chinook-Snake-River-spring-summer-run-ESU-ICSRSSchinookSurvey2020.Rmd in VRData 2.3.
Salmon-Chinook-Snake-River-spring-summer-run-ESU-ICSRSSchinookSurveySBT2020Updated 3 years ago

Elizabeth Holmes - NOAA Federal

Rendered from Salmon-Chinook-Snake-River-spring-summer-run-ESU-ICSRSSchinookSurveySBT2020.Rmd in VRData 2.3.
Salmon-Chinook-Upper-Columbia-River-spring-run-ESU-ICUCchinook2020Updated 3 years ago

Elizabeth Holmes - NOAA Federal

Rendered from Salmon-Chinook-Upper-Columbia-River-spring-run-ESU-ICUCchinook2020.Rmd in VRData 2.3.
Salmon-Chinook-Upper-Willamette-River-ESU-UWchinook2020Updated 3 years ago

Elizabeth Holmes - NOAA Federal

Rendered from Salmon-Chinook-Upper-Willamette-River-ESU-UWchinook2020.Rmd in VRData 2.3.
Salmon-chum-Columbia-River-ESU-CRchum2020Updated 3 years ago

Elizabeth Holmes - NOAA Federal

Rendered from Salmon-chum-Columbia-River-ESU-CRchum2020.Rmd in VRData 2.3.
Salmon-coho-Lower-Columbia-River-ESU-LCcoho2020Updated 3 years ago

Elizabeth Holmes - NOAA Federal

Rendered from Salmon-coho-Lower-Columbia-River-ESU-LCcoho2020.Rmd in VRData 2.3.
Salmon-coho-Oregon-Coast-ESU-OCcoho2020Updated 3 years ago

Elizabeth Holmes - NOAA Federal

Rendered from Salmon-coho-Oregon-Coast-ESU-OCcoho2020.Rmd in VRData 2.3.
Steelhead-Lower-Columbia-River-DPS-LCsthd2020Updated 3 years ago

Elizabeth Holmes - NOAA Federal

Rendered from Steelhead-Lower-Columbia-River-DPS-LCsthd2020.Rmd in VRData 2.3.
Steelhead-Middle-Columbia-River-DPS-ICMC2021Updated 3 years ago

Elizabeth Holmes - NOAA Federal

Rendered from Steelhead-Middle-Columbia-River-DPS-ICMC2021.Rmd in VRData 2.3.
Steelhead-Puget-Sound-DPS-PSsteelhead2020Updated 3 years ago

Elizabeth Holmes - NOAA Federal

Rendered from Steelhead-Puget-Sound-DPS-PSsteelhead2020.Rmd in VRData 2.3.
Steelhead-Snake-River-Basin-DPS-ICSRsthdGSIUpdated 3 years ago

Elizabeth Holmes - NOAA Federal

Rendered from Steelhead-Snake-River-Basin-DPS-ICSRsthdGSI.Rmd in VRData 2.3.
Steelhead-Snake-River-Basin-DPS-ICSRsthdModelUpdated 3 years ago

Elizabeth Holmes - NOAA Federal

Rendered from Steelhead-Snake-River-Basin-DPS-ICSRsthdModel.Rmd in VRData 2.3.
Steelhead-Snake-River-Basin-DPS-ICSRsthdSurveyUpdated 3 years ago

Elizabeth Holmes - NOAA Federal

Rendered from Steelhead-Snake-River-Basin-DPS-ICSRsthdSurvey.Rmd in VRData 2.3.
Steelhead-Upper-Columbia-River-DPS-ICUCsthdModelUpdated 3 years ago

Elizabeth Holmes - NOAA Federal

Rendered from Steelhead-Upper-Columbia-River-DPS-ICUCsthdModel.Rmd in VRData 2.3.
Steelhead-Upper-Columbia-River-DPS-ICUCsthdSurvey2020Updated 3 years ago

Elizabeth Holmes - NOAA Federal

Rendered from Steelhead-Upper-Columbia-River-DPS-ICUCsthdSurvey2020.Rmd in VRData 2.3.
Steelhead-Upper-Willamette-River-DPS-UWsthd2020Updated 3 years ago

Elizabeth Holmes - NOAA Federal

Rendered from Steelhead-Upper-Willamette-River-DPS-UWsthd2020.Rmd in VRData 2.3.
Changing demographic ratesUpdated 3 years ago

Eric J. Ward

Rendered from a2demogrates.Rmd in kwdemog 1.0.3.
Prior sensitivity for overdispersionUpdated 3 years ago

Eric J. Ward

Rendered from a04_priors.Rmd in zoid 1.3.1.
Priors for compositionsUpdated 3 years ago

Eric J. Ward

Rendered from a03_beta_priors.Rmd in zoid 1.3.1.
Simulating dataUpdated 3 years ago

Eric J. Ward

Rendered from a02_simulating.Rmd in zoid 1.3.1.
MethodsUpdated 3 years ago

Elizabeth Holmes - NOAA Federal

Rendered from Methods.Rmd in NWCTrends 1.30.
Example codeUpdated 3 years ago

Elizabeth Holmes - NOAA Federal

Rendered from demo-code.Rmd in NWCTrends 1.30.
demo-dataUpdated 3 years ago

Elizabeth Holmes - NOAA Federal

Rendered from demo-data.Rmd in NWCTrends 1.30.
Introduction to using time varying vector autoregressive models (TVVARSS)Updated 4 years ago

Eric Ward, Mark Scheuerell, Steve Katz

Rendered from intro_tvvarss.Rmd in tvvarss 0.1.1.