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Package: rCAX 1.0.3

Eli Holmes

rCAX: Coordinated Assessments REST API R Client

This package is an R client for the StreamNet Coordinated Assessments HLI REST API.

Authors:Eli Holmes [aut, cre], Mari Williams [aut], Katie Barnas [ctb]

rCAX_1.0.3.tar.gz
rCAX_1.0.3.zip(r-4.5)rCAX_1.0.3.zip(r-4.4)rCAX_1.0.3.zip(r-4.3)
rCAX_1.0.3.tgz(r-4.4-any)rCAX_1.0.3.tgz(r-4.3-any)
rCAX_1.0.3.tar.gz(r-4.5-noble)rCAX_1.0.3.tar.gz(r-4.4-noble)
rCAX_1.0.3.tgz(r-4.4-emscripten)rCAX_1.0.3.tgz(r-4.3-emscripten)
rCAX.pdf |rCAX.html✨
rCAX/json (API)
NEWS

# Install 'rCAX' in R:

install.packages('rCAX', repos = c('https://nmfs-opensci.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/nwfsc-cb/rcax/issues

On CRAN:

noaa rest-api salmon

4.78 score 5 stars 8 scripts 17 exports 9 dependencies

Last updated 12 months agofrom:cc3dc03f72. Checks:OK: 2 NOTE: 3 ERROR: 2. Indexed: no.

Target	Result	Date
Doc / Vignettes	OK	Nov 25 2024
R-4.5-win	NOTE	Nov 25 2024
R-4.5-linux	NOTE	Nov 25 2024
R-4.4-win	NOTE	Nov 25 2024
R-4.4-mac	ERROR	Nov 25 2024
R-4.3-win	OK	Nov 25 2024
R-4.3-mac	ERROR	Nov 25 2024

Exports:check_key rcax_base rcax_citation rcax_datasets rcax_escdata rcax_filter rcax_GET rcax_hli rcax_parse rcax_superpops rcax_table_cols rcax_table_name rcax_table_query rcax_table_sortcols rcax_termsofuse rcax_ua rcax_version

Dependencies:crul curl httpcode jsonlite mime R6 Rcpp triebeard urltools

Basic HLI queries

Rendered frombasics.Rmdusingknitr::rmarkdownon Nov 25 2024.

Last update: 2023-11-28
Started: 2022-12-02

CAX Data Terms of Use

Rendered fromterms.Rmdusingknitr::rmarkdownon Nov 25 2024.

Last update: 2022-12-07
Started: 2022-12-05

CAX Datasets

Rendered fromCAX_Tables.Rmdusingknitr::rmarkdownon Nov 25 2024.

Last update: 2022-12-15
Started: 2022-12-02

Getting Started

Rendered fromsetup.Rmdusingknitr::rmarkdownon Nov 25 2024.

Last update: 2023-11-28
Started: 2022-12-07

rCAX API query function

Rendered fromapi_get.Rmdusingknitr::rmarkdownon Nov 25 2024.

Last update: 2023-04-21
Started: 2022-12-02

Using CAX HLI data

Rendered fromcax.Rmdusingknitr::rmarkdownon Nov 25 2024.

Last update: 2023-01-10
Started: 2022-12-07

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
rCAX	rCAX-package rCAX
Column names and definitions	cax_column_definitions
ESU/DPS names	caxesu
CAX API table names and table_id	caxtabs
Get the key from the user system environment variable	check_key
Internal data used by functions	internal_data
Set the base API url	rcax_base
Get the citation CAX version	rcax_citation
Get the list of CAX datasets (tables) with ids	rcax_datasets
Get EscData table	rcax_escdata
Create filter to add to GET call	rcax_filter
Make a GET call to API	rcax_GET
Return fish HLI tables from Coordinated Assessments data eXchange	rcax_hli
Parse results from API call	rcax_parse
Get SuperPopulations table	rcax_superpops
Returns the colnames to use for tables	rcax_table_cols
Return table name given the HLI short name	rcax_table_name
Return tables by table name from Coordinated Assessments data eXchange	rcax_table_query
Returns the default sort columns for tables	rcax_table_sortcols
Get CAX HLI data Terms of Use	rcax_termsofuse
Make the user agent string	rcax_ua
Look up the rCAX versions	rcax_version