Package: marssTMB 0.0.14
marssTMB: Fast fitting of MARSS models with TMB
Companion to the MARSS package. Fast fitting of MARSS models with TMB. See the MARSS documentation. All the model syntax and features are the same as for the MARSS package.
Authors:
marssTMB_0.0.14.tar.gz
marssTMB_0.0.14.zip(r-4.5)marssTMB_0.0.14.zip(r-4.4)marssTMB_0.0.14.zip(r-4.3)
marssTMB_0.0.14.tgz(r-4.4-x86_64)marssTMB_0.0.14.tgz(r-4.4-arm64)marssTMB_0.0.14.tgz(r-4.3-x86_64)marssTMB_0.0.14.tgz(r-4.3-arm64)
marssTMB_0.0.14.tar.gz(r-4.5-noble)marssTMB_0.0.14.tar.gz(r-4.4-noble)
marssTMB.pdf |marssTMB.html✨
marssTMB/json (API)
NEWS
# Install 'marssTMB' in R: |
install.packages('marssTMB', repos = c('https://nmfs-opensci.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/atsa-es/marsstmb/issues
marssmultivariate-timeseriesstate-space-modeltime-seriestmb
Last updated 2 years agofrom:32308960f2. Checks:OK: 1 WARNING: 8. Indexed: no.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 25 2024 |
R-4.5-win-x86_64 | WARNING | Nov 25 2024 |
R-4.5-linux-x86_64 | WARNING | Nov 25 2024 |
R-4.4-win-x86_64 | WARNING | Nov 25 2024 |
R-4.4-mac-x86_64 | WARNING | Nov 25 2024 |
R-4.4-mac-aarch64 | WARNING | Nov 25 2024 |
R-4.3-win-x86_64 | WARNING | Nov 25 2024 |
R-4.3-mac-x86_64 | WARNING | Nov 25 2024 |
R-4.3-mac-aarch64 | WARNING | Nov 25 2024 |
Exports:dfaTMBestimate_marssestimate_marss2marssTMB_CheckPackageVersionsvar_to_cholvar
Dependencies:genericsKFASlatticeMARSSMatrixmvtnormnlmeRcppRcppEigenTMB
dfaTMB: Dynamic Factor Analysis
Rendered fromdfaTMB.Rmd
usingknitr::rmarkdown
on Nov 25 2024.Last update: 2023-05-11
Started: 2023-05-01
Dynamic Factor Analysis
Rendered fromMARSS_TMB.Rmd
usingknitr::rmarkdown
on Nov 25 2024.Last update: 2023-05-11
Started: 2023-05-01
Optimization discussion
Rendered fromOptimization.Rmd
usingknitr::rmarkdown
on Nov 25 2024.Last update: 2023-05-07
Started: 2023-05-04
Quick Start
Rendered fromQuick_Start.Rmd
usingknitr::rmarkdown
on Nov 25 2024.Last update: 2023-05-11
Started: 2023-05-04
Speed Comparisons
Rendered fromComparisons.Rmd
usingknitr::rmarkdown
on Nov 25 2024.Last update: 2023-05-20
Started: 2023-05-11
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Tim Cline's original code to Fit a DFA model with TMB. | dfaTMB |
Internal function: MARSS parameter estimation using TMB | estimate_marss |
Internal function: MARSS parameter estimation using TMB | estimate_marss2 |
MARSS parameter estimation using TMB | MARSSfit.TMB |
Check TMB and Matrix versions | marssTMB_CheckPackageVersions |
Return R, Q and V0 with free and par for chol of matrix | var_to_cholvar |